Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916608.1_cds_XP_016466309.1_59175
CDS Infomation

[gene=LOC107789055] [db_xref=GeneID:107789055] [protein=laccase-11-like] [protein_id=XP_016466309.1] [location=join(74293..74400,74534..74685,74777..75021,75133..75261,75368..76291,76379..76509)] [gbkey=CDS]
Sequence

ATGGCAAAGCAGACAAGTTTCTGTCCAGTCCTAGGCTTCCTTGTCATTGGATTTCTTTGT
TTCATTTGTCTACCTGCTGAGGCTGCCCTTAAGAAATATCAGTTTGATGTTCAAGTGGCA
AATGTGAGCAGATTGTGCCATGCAAAACCAATTGTTACAGTTAATGGGAGATTTCCGGGG
CCAACTATATATGCTAGAGAAGGAGATAGAGTTCAAATCAATGTTACTAACTTTGCACAA
TATAACTTGTCCATTCACTGGCATGGATTGAAACAATATCGCAATGGTTGGGCAGACGGG
CCGGCTTACATAACTCAGTGCCCAATTCAGACAGGAAATAGCTATGTTTATGACTTCAAT
ATAACAGGACAAAGAGGAACCTTATGGTGGCATGCACACATTCTTTGGCTAAGGGCAACA
GTCTATGGTCCTATAGTGATCTTGCCACAACAAGGAACTCCCTTTCCTTTCCCTCAACCA
GATAGGGAAGAAGTACTTGTACTAGGAGAATGGTGGAATGCTGATGTAGAAGAAGTTGAG
AAACAAGGAAACGCCTTGGGTATACCTCCTAATATGTCTGATGCCCACACGATCAACGGA
AAGCCAGGGCCTCTTTTCCCATGTTCTGAGAAACATACTTTTGCCATGGAAGTTGAAAAA
GGGAAGACATACCTGTTGAGAATCATCAACGCTGCTCTCAATGATGAGCTGTTTTTTGCC
CTGGCTAATCATACCTTCACAGTGGTAGAAATTGATGCAGTCTACACGAAACCATTCACC
ACAGAGGCCATTCTGATTGCGCCAGGGCAGACTACAAACGTTCTGGTTCGTGCCAACCAA
ATTCCAGGAAGATATTTCATGGCTGCAAGGGCATTCATGGATGCTCCAATCTCTGTGGAT
AACAAGACTGCTACTGCTATATTCCAGTATAAGGGAATCCCACAAACTGTACTCCCAAAA
CTTCCAACCTTGCCTGAACAAAATGACACAAACTTTGCTTTGACCTATAACTCTAAACTC
AAAAGCCTAAATACCCCTAAATATCCAGCAAATGTTCCCCTAAATGTTGATCGACACCTC
TTGTTTACAATTGGCCTGGGAATAAATCCTTGTCCCACCTGTCTAAATGGAACTCGGTTA
ACAGCTTCTCTCAACAACATTACCTTTAGCATGCCACAAACTGCACTTCTTCAAGCTCAT
TACTTCAACATTAAGGGTGTGTATACTCCAGATTTCCCTGACAAACCACCTACTCCATTC
AATTTTACAGGGGCACCTCTTACAGCCAACCTAAAGACAAATCTAGGCACAAGGCTTAAT
AAGATTGCTTTCAATTCCACTGTCGAACTAGTAATCCAAGACACCAACTTATTATCGGTG
GAATCACATCCTTTCCATCTCCATGGCTACAATTTCTTTGTGGTTGGAACTGGTGTCGGA
AACTTTGACCCCAAAAAAGATCCAGCAAAATACAACTTGATTGATCCTATAGAAAGAAAT
ACTGTAGGTGTTCCAACGGGTGGTTGGACTGCTATTCGGTTCAGAGCTGATAATCCAGGG
GTCTGGTTTTTCCATTGTCATCTGGAGTTGCACACAGGATGGGGACTGAAAACAGCATTT
TTAGTGGAAGATGGACCAGGATCAGATCACAATATTCTTCCTCCACCAAAGGATCTTCCA
CGCTGCTAA

Peptide Sequence

PEP ID

XP_016466309.1
PEP Infomation

PREDICTED: laccase-11-like [Nicotiana tabacum]
Sequence

MAKQTSFCPVLGFLVIGFLCFICLPAEAALKKYQFDVQVANVSRLCHAKPIVTVNGRFPG
PTIYAREGDRVQINVTNFAQYNLSIHWHGLKQYRNGWADGPAYITQCPIQTGNSYVYDFN
ITGQRGTLWWHAHILWLRATVYGPIVILPQQGTPFPFPQPDREEVLVLGEWWNADVEEVE
KQGNALGIPPNMSDAHTINGKPGPLFPCSEKHTFAMEVEKGKTYLLRIINAALNDELFFA
LANHTFTVVEIDAVYTKPFTTEAILIAPGQTTNVLVRANQIPGRYFMAARAFMDAPISVD
NKTATAIFQYKGIPQTVLPKLPTLPEQNDTNFALTYNSKLKSLNTPKYPANVPLNVDRHL
LFTIGLGINPCPTCLNGTRLTASLNNITFSMPQTALLQAHYFNIKGVYTPDFPDKPPTPF
NFTGAPLTANLKTNLGTRLNKIAFNSTVELVIQDTNLLSVESHPFHLHGYNFFVVGTGVG
NFDPKKDPAKYNLIDPIERNTVGVPTGGWTAIRFRADNPGVWFFHCHLELHTGWGLKTAF
LVEDGPGSDHNILPPPKDLPRC

Transcript Sequence

Gene sequence data has not been registered.